These days, it’s really easy to identify new viruses. The technology has advanced so much you can take a sample from an animal, person or environment, and sequence a vast range of viruses. Finding them is easy. Understanding them? That’s the challenge.
Our ability to find has greatly outpaced our ability to know what finding them means.
As a reviewer, I see lots of papers describing new viruses. Most of these are probably old viruses that we just found. Often, studies report “look what we found” but don’t take it the next step to figure out if it’s relevant, or, they overstate the relevance. I might find a new virus in a sick animal, but that doesn’t mean the virus is causing disease. It might have just been there as part of the normal innocuous viral population that lives on and around us.
So, we don’t want to dismiss new things but also don’t want to over-react.
That’s a general lead-in to discussion of a specific virus… amdoparvovirus (or more specifically, raccoon dog and fox amdoparvovirus…RFAV).
Amdoparvovirus in part of the Parvoviridae family, like canine parvovirus, but is a distinct genus. The amdoparvovirus genus includes a variety of different viruses that infect a variety of mammals, particularly mustelids (e.g. ferrets, mink) skunks and raccoons. One of those is the cause of Aleutian disease, a serious disease in mink.
Raccoon dog and fox amdoparvovirus was first reported in 2014 as part of an investigation of an outbreak in raccoon dogs and Arctic foxes on fur farms in China. Disease was most severe in young animals, with signs like decreased appetite, weight loss, slow growth and chronic diarrhea, with histological evidence of gastrointestinal and kidney impacts.
A new preprint (non-peer reviewed preliminary paper) by Gajdov et al described an outbreak of disease in dogs attributed to RFAV. Not surprisingly, given the social media world we live in, in some places it’s gone from “interesting….here’s a potential spillover of disease in a single kennel” to “OMG, a NEW…DOG…VIRUS..!!!!!!!”.
When I see reports of ‘new’ issues, I pay attention but also keep a healthy dose of skepticism in place.
Most of the time, a strange disease is just an unusual presentation of a normal disease. Similarly, a truly new situation (like RFAV in dogs) is more often a rare event or something that’s happened not previously been recognized, versus true emergence of a new problem.
However, it’s better to be proactive than complacent, so I pay attention.
This preprint describes an interesting outbreak with some nice details along with some clear gaps.
Here’s a synopsis.
An outbreak of disease was identified in Dobermanns in a kennel in Serbia. Affected dogs had abnormalities such as ocular and nasal discharges, conjunctivitis and weight loss, with some dogs also having ‘blue eye’, liver disease or, at later stages, neurological disease. This sounds pretty textbook for canine distemper. They tested for distemper, among other things, and results were negative. The paper states that samples were submitted initially from a dog and her two puppies, and it’s not clear if only those were tested for distemper or whether other dogs were as well. More details about the testing (tests, numbers, timing) would be useful to help understand if we can really exclude distemper because, as the old adage goes, ‘common things occur commonly.’ However, they talk about repeated testing and presumably they had done a pretty good investigation before embarking on sequencing to identify something new.
So, they then went virus hunting, using sequencing to look for viruses present in lung, kidney and liver samples from the dog and puppies. They found RFAV—or, more specifically, sequences with ~97% genetic similarity to the limited number of known RFAV genomes. We know relatively little about the genetic variation of this virus in nature, which is important for interpreting this finding. If the virus is genetically similar to RFAV strains circulating in wildlife, that would support direct spillover into the kennel from an infected wild animal. If it is substantially different from viruses circulating in wildlife, that could suggest that it represents a distinct variant, although that still wouldn’t mean it is a canine-adapted virus. It’s way too early to say. At this point, a spillover of RFAV into dogs seems more likely than the emergence of a distinct canine virus.
They then developed a PCR test specific for this virus. They got positive results from one other epidemiologically linked dog and an undefined number of healthy dogs from other locations tested negative. They don’t say if they tested other affected dogs. That’s important context. The more sick dogs that test positive and the more healthy dogs that test negative, the more convincing it looks that the virus is clinically relevant. Even with that, association doesn’t necessarily mean causation.
Lack of histopathology (both in general and species testing to look for evidence of canine distemper virus) is a limitation. I wonder if they’ll get asked to do that for publication. A review might suggest that be done and I’d hope they still have tissue.
Another gap is the limited epidemiological data. No information was provided about potential sources of exposure or transmission patterns. I would have wanted more details about the kennel, numbers of affected and unaffected dogs, a timeline of how infections developed, kennel management practices and diet, as well as potential opportunities for direct or indirect contact with wildlife. There shouldn’t be farmed raccoon dogs or foxes in the area since that’s been banned in Serbia, but wild fox exposure would be something I’d want to look at closely.
Where does this leave us? Is this…
- A new emerging disease from a new virus that will spread and cause widespread problems.
- An uncommon but periodic spillover that just hasn’t been identified before because such detailed investigation is rare.
- A co-infection where RFAV is maybe involved in disease but there’s something else involved.
- confluence of factors that allowed a really rare scenario to develop.
- A distemper outbreak that was not detected.
I’d like to have convincing details to rule out E before anything else, but if that’s convincing, I’d guess it’s B….these researchers identified a ‘new to us’ versus ‘truly new’ scenario.
That doesn’t downplay the usefulness of this. We need to know what to look for, and studies like this form the foundation for further studies to help figure out if this is actually a health threat in dogs and how common it is. Now that this is on the radar, testing can be done (not commercially, but with research labs) in situations where it might be relevant. We’d also need to have testing of healthy dogs for context.
Awareness vs panic is always tough to balance with infectious diseases. This report tells us we have something else to consider and the investigate further, not that we have a new concerning problem that’s causing an imminent threat.










